Proximal

SK-MEL-5(Human) | 9425 records |

Coordinate Validation Epigenomic status Core promoter element(s) Mutation TF registry
chr3:52239079-52239284 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:2; Rare:72
chr3:52278334-52278791 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:157
chr3:52287742-52287863 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:2; Rare:51
chr3:52288000-52288085 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:31
chr3:52405674-52405819 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:45; Clinvar:5; Clinvar (benign):10
chr3:52410351-52410687 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:71
chr3:52455459-52455650 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:2; Rare:68
chr3:52536377-52536748 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:2; Rare:124
chr3:52685536-52686269 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:4; Rare:242
chr3:52692921-52693357 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:2; Rare:143
chr3:52693433-52693805 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:6; Rare:126
chr3:52705558-52706299 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:4; Rare:241
chr3:52770913-52771035 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:2; Rare:27
chr3:53130396-53130523 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:45; Clinvar:1; Clinvar (benign):3
chr3:53229435-53229511 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:26
  • Legend for epigenomic status:
  • K27ac K4me3 CTCF : Enriched for H3K27ac and DNaseI signal
  • K27ac K4me3 CTCF : Enriched for H3K4me3 and DNaseI signal
  • K27ac K4me3 CTCF : Enriched for CTCF binding signal
  • Legend for core promoter element:
  • I DPR TATA I DPR TATA : Found Initiator
  • I DPR TATA I DPR TATA : Found DPR
  • I DPR TATA I DPR TATA : Enriched TATA box