Proximal

SK-MEL-5(Human) | 9425 records |
Coordinate Validation Epigenomic status Core promoter element(s) Mutation TF registry
chr1:153986114-153986449 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:87
chr1:153990655-153990968 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:2; Rare:130
chr1:153991031-153991223 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:53
chr1:154172906-154173144 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:46; Clinvar:1; Clinvar (benign):2; Clinvar (pathogenic):2
chr1:154182636-154183304 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:178
chr1:154219834-154220221 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:5; Rare:110
chr1:154220498-154221033 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:181
chr1:154221250-154221383 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:30
chr1:154272445-154272776 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:4; Rare:84; Clinvar:3; Clinvar (benign):3
chr1:154405461-154405607 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:30
chr1:154558226-154558460 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:68
chr1:154558908-154559106 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:72
chr1:154608795-154608830 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:3; Rare:6
chr1:154627862-154628057 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:4; Rare:95
chr1:154936606-154936780 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:2; Rare:60
  • Legend for epigenomic status:
  • K27ac K4me3 CTCF : Enriched for H3K27ac and DNaseI signal
  • K27ac K4me3 CTCF : Enriched for H3K4me3 and DNaseI signal
  • K27ac K4me3 CTCF : Enriched for CTCF binding signal
  • Legend for core promoter element:
  • I DPR TATA I DPR TATA : Found Initiator
  • I DPR TATA I DPR TATA : Found DPR
  • I DPR TATA I DPR TATA : Enriched TATA box