Proximal

Karpas-422(Human) | 4556 records |
Format: chr:start-end (hg38)
Coordinate Validation Epigenomic status Core promoter element(s) Mutation TF registry
chr1:19596742-19597052 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:3; Rare:107
chr1:19799878-19799989 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:45
chr1:20661346-20661727 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:3; Rare:137; Clinvar:4; Clinvar (benign):6
chr1:21290421-21290495 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:18
chr1:21345483-21345674 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:71
chr1:23344226-23344576 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:2; Rare:116
chr1:23368216-23368513 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:85
chr1:23559479-23559643 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:68
chr1:23778250-23778537 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:9; Rare:138
chr1:23791041-23791217 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:54
chr1:23800753-23800908 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:48
chr1:23825411-23825504 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:34; Clinvar:1; Clinvar (benign):2; Clinvar (pathogenic):1
chr1:23868273-23868531 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:5; Rare:70; Clinvar:1; Clinvar (benign):4
chr1:23959080-23959204 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:2; Rare:23
chr1:23959641-23959868 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:2; Rare:63
  • Legend for epigenomic status:
  • K27ac K4me3 CTCF : Enriched for H3K27ac and DNaseI signal
  • K27ac K4me3 CTCF : Enriched for H3K4me3 and DNaseI signal
  • K27ac K4me3 CTCF : Enriched for CTCF binding signal
  • Legend for core promoter element:
  • I DPR TATA I DPR TATA : Found Initiator
  • I DPR TATA I DPR TATA : Found DPR
  • I DPR TATA I DPR TATA : Enriched TATA box