Proximal

Karpas-422(Human) | 4556 records |
Format: chr:start-end (hg38)
Coordinate Validation Epigenomic status Core promoter element(s) Mutation TF registry
chr1:159925463-159925617 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:42
chr1:160031841-160032028 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:2; Rare:48
chr1:160262436-160262653 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:69
chr1:160343181-160343399 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:90
chr1:160711781-160712008 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:5; Rare:52
chr1:161045887-161046047 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:42
chr1:161118021-161118141 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:59
chr1:161166268-161166477 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:2; Rare:49; Clinvar:2; Clinvar (benign):1
chr1:161225757-161226069 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:10; Rare:46
chr1:161314215-161314408 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:3; Rare:68; Clinvar:2; Clinvar (benign):2; Clinvar (pathogenic):1
chr1:161524395-161524541 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:3; Rare:46
chr1:161707108-161707293 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:3; Rare:55
chr1:161707308-161707342 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:8
chr1:161721365-161721592 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:2; Rare:37
chr1:161749614-161749822 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:70
  • Legend for epigenomic status:
  • K27ac K4me3 CTCF : Enriched for H3K27ac and DNaseI signal
  • K27ac K4me3 CTCF : Enriched for H3K4me3 and DNaseI signal
  • K27ac K4me3 CTCF : Enriched for CTCF binding signal
  • Legend for core promoter element:
  • I DPR TATA I DPR TATA : Found Initiator
  • I DPR TATA I DPR TATA : Found DPR
  • I DPR TATA I DPR TATA : Enriched TATA box