Proximal

Karpas-422(Human) | 4556 records |
Format: chr:start-end (hg38)
Coordinate Validation Epigenomic status Core promoter element(s) Mutation TF registry
chr1:1013388-1013514 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:3; Rare:41
chr1:1324600-1324932 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:3; Rare:158
chr1:1331170-1331361 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:2; Rare:73
chr1:1375164-1375478 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:5; Rare:82
chr1:1399280-1399610 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:153
chr1:1407167-1407312 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:73
chr1:1658938-1659290 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:5; Rare:136
chr1:1724299-1724510 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:4; Rare:72
chr1:1780139-1780363 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:36
chr1:2391540-2391873 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:2; Rare:124
chr1:3857193-3857485 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:78
chr1:3900219-3900406 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:11; Rare:87
chr1:6026155-6026381 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:49
chr1:6625073-6625216 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:57
chr1:7961455-7961767 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:4; Rare:107; Clinvar:2; Clinvar (benign):3
  • Legend for epigenomic status:
  • K27ac K4me3 CTCF : Enriched for H3K27ac and DNaseI signal
  • K27ac K4me3 CTCF : Enriched for H3K4me3 and DNaseI signal
  • K27ac K4me3 CTCF : Enriched for CTCF binding signal
  • Legend for core promoter element:
  • I DPR TATA I DPR TATA : Found Initiator
  • I DPR TATA I DPR TATA : Found DPR
  • I DPR TATA I DPR TATA : Enriched TATA box