Proximal

HCT116(Human) | 17414 records |
Format: chr:start-end (hg38)
Coordinate Validation Epigenomic status Core promoter element(s) Mutation TF registry
chr3:49018312-49018459 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:47
chr3:49018564-49018683 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:43
chr3:49020674-49020821 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:41
chr3:49021417-49021768 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:87; Clinvar:1
chr3:49021897-49022208 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:96; Clinvar:3; Clinvar (pathogenic):1
chr3:49029374-49029605 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:2; Rare:156
chr3:49093571-49093790 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:71
chr3:49093987-49094204 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:50
chr3:49094324-49094702 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:2; Rare:100
chr3:49104689-49105014 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:127; Clinvar:1; Clinvar (benign):5
chr3:49120735-49120960 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:70
chr3:49132243-49132643 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:187; Clinvar:7; Clinvar (benign):2; Clinvar (pathogenic):2
chr3:49132988-49133333 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:63; Clinvar:1
chr3:49166280-49166521 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:55
chr3:49171450-49171638 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:2; Rare:39
  • Legend for epigenomic status:
  • K27ac K4me3 CTCF : Enriched for H3K27ac and DNaseI signal
  • K27ac K4me3 CTCF : Enriched for H3K4me3 and DNaseI signal
  • K27ac K4me3 CTCF : Enriched for CTCF binding signal
  • Legend for core promoter element:
  • I DPR TATA I DPR TATA : Found Initiator
  • I DPR TATA I DPR TATA : Found DPR
  • I DPR TATA I DPR TATA : Enriched TATA box