Proximal

SK-N-SH(Human) | 7944 records |
Format: chr:start-end (hg38)
Coordinate Validation Epigenomic status Core promoter element(s) Mutation TF registry
chr3:52154379-52154473 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:1; Rare:31
chr3:52239000-52239268 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:2; Rare:89
chr3:52287759-52287873 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:2; Rare:46
chr3:52288015-52288063 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:17
chr3:52403279-52403589 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:94; Clinvar:17; Clinvar (benign):14
chr3:52455328-52455686 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:2; Rare:107
chr3:52525015-52525316 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:9; Rare:132
chr3:52527295-52527725 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:3; Rare:127
chr3:52528012-52528202 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:67
chr3:52533507-52534039 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:7; Rare:141
chr3:52534227-52534252 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:3
chr3:52534518-52534872 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:3; Rare:82
chr3:52536840-52536899 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:13
chr3:52685539-52685726 K27ac K4me3 CTCF I DPR TATA I DPR TATA Rare:56
chr3:52685752-52686121 K27ac K4me3 CTCF I DPR TATA I DPR TATA Common:3; Rare:133
  • Legend for epigenomic status:
  • K27ac K4me3 CTCF : Enriched for H3K27ac and DNaseI signal
  • K27ac K4me3 CTCF : Enriched for H3K4me3 and DNaseI signal
  • K27ac K4me3 CTCF : Enriched for CTCF binding signal
  • Legend for core promoter element:
  • I DPR TATA I DPR TATA : Found Initiator
  • I DPR TATA I DPR TATA : Found DPR
  • I DPR TATA I DPR TATA : Enriched TATA box